一般来说,有没有一种有效的方法可以知道Python中的迭代器中有多少个元素,而不用遍历每个元素并计数?
当前回答
我决定在现代版本的Python上重新运行基准测试,并发现几乎完全颠倒了基准测试
我运行了以下命令:
py -m timeit -n 10000000 -s "it = iter(range(1000000))" -s "from collections import deque" -s "from itertools import count" -s "def itlen(x):" -s " return len(tuple(x))" -- "itlen(it)"
py -m timeit -n 10000000 -s "it = iter(range(1000000))" -s "from collections import deque" -s "from itertools import count" -s "def itlen(x):" -s " return len(list(x))" -- "itlen(it)"
py -m timeit -n 10000000 -s "it = iter(range(1000000))" -s "from collections import deque" -s "from itertools import count" -s "def itlen(x):" -s " return sum(map(lambda i: 1, x))" -- "itlen(it)"
py -m timeit -n 10000000 -s "it = iter(range(1000000))" -s "from collections import deque" -s "from itertools import count" -s "def itlen(x):" -s " return sum(1 for _ in x)" -- "itlen(it)"
py -m timeit -n 10000000 -s "it = iter(range(1000000))" -s "from collections import deque" -s "from itertools import count" -s "def itlen(x):" -s " d = deque(enumerate(x, 1), maxlen=1)" -s " return d[0][0] if d else 0" -- "itlen(it)"
py -m timeit -n 10000000 -s "it = iter(range(1000000))" -s "from collections import deque" -s "from itertools import count" -s "def itlen(x):" -s " counter = count()" -s " deque(zip(x, counter), maxlen=0)" -s " return next(counter)" -- "itlen(it)"
它们等价于为以下每个itlen*(it)函数计时:
it = iter(range(1000000))
from collections import deque
from itertools import count
def itlen1(x):
return len(tuple(x))
def itlen2(x):
return len(list(x))
def itlen3(x):
return sum(map(lambda i: 1, x))
def itlen4(x):
return sum(1 for _ in x)
def itlen5(x):
d = deque(enumerate(x, 1), maxlen=1)
return d[0][0] if d else 0
def itlen6(x):
counter = count()
deque(zip(x, counter), maxlen=0)
return next(counter)
在装有AMD Ryzen 7 5800H和16 GB RAM的Windows 11、Python 3.11机器上,我得到了以下输出:
10000000 loops, best of 5: 103 nsec per loop
10000000 loops, best of 5: 107 nsec per loop
10000000 loops, best of 5: 138 nsec per loop
10000000 loops, best of 5: 164 nsec per loop
10000000 loops, best of 5: 338 nsec per loop
10000000 loops, best of 5: 425 nsec per loop
这表明len(list(x))和len(tuple(x))是绑定的;后面跟着sum(map(lambda i: 1, x));然后紧靠sum(1 for _ in x);那么其他答案中提到的其他更复杂的方法和/或在基数中使用的方法至少要慢两倍。
其他回答
一个简单的方法是使用内置函数set()或list():
答:set()在迭代器中没有重复项的情况下(最快的方式)
iter = zip([1,2,3],['a','b','c'])
print(len(set(iter)) # set(iter) = {(1, 'a'), (2, 'b'), (3, 'c')}
Out[45]: 3
or
iter = range(1,10)
print(len(set(iter)) # set(iter) = {1, 2, 3, 4, 5, 6, 7, 8, 9}
Out[47]: 9
B: list()以防迭代器中有重复的项
iter = (1,2,1,2,1,2,1,2)
print(len(list(iter)) # list(iter) = [1, 2, 1, 2, 1, 2, 1, 2]
Out[49]: 8
# compare with set function
print(len(set(iter)) # set(iter) = {1, 2}
Out[51]: 2
我决定在现代版本的Python上重新运行基准测试,并发现几乎完全颠倒了基准测试
我运行了以下命令:
py -m timeit -n 10000000 -s "it = iter(range(1000000))" -s "from collections import deque" -s "from itertools import count" -s "def itlen(x):" -s " return len(tuple(x))" -- "itlen(it)"
py -m timeit -n 10000000 -s "it = iter(range(1000000))" -s "from collections import deque" -s "from itertools import count" -s "def itlen(x):" -s " return len(list(x))" -- "itlen(it)"
py -m timeit -n 10000000 -s "it = iter(range(1000000))" -s "from collections import deque" -s "from itertools import count" -s "def itlen(x):" -s " return sum(map(lambda i: 1, x))" -- "itlen(it)"
py -m timeit -n 10000000 -s "it = iter(range(1000000))" -s "from collections import deque" -s "from itertools import count" -s "def itlen(x):" -s " return sum(1 for _ in x)" -- "itlen(it)"
py -m timeit -n 10000000 -s "it = iter(range(1000000))" -s "from collections import deque" -s "from itertools import count" -s "def itlen(x):" -s " d = deque(enumerate(x, 1), maxlen=1)" -s " return d[0][0] if d else 0" -- "itlen(it)"
py -m timeit -n 10000000 -s "it = iter(range(1000000))" -s "from collections import deque" -s "from itertools import count" -s "def itlen(x):" -s " counter = count()" -s " deque(zip(x, counter), maxlen=0)" -s " return next(counter)" -- "itlen(it)"
它们等价于为以下每个itlen*(it)函数计时:
it = iter(range(1000000))
from collections import deque
from itertools import count
def itlen1(x):
return len(tuple(x))
def itlen2(x):
return len(list(x))
def itlen3(x):
return sum(map(lambda i: 1, x))
def itlen4(x):
return sum(1 for _ in x)
def itlen5(x):
d = deque(enumerate(x, 1), maxlen=1)
return d[0][0] if d else 0
def itlen6(x):
counter = count()
deque(zip(x, counter), maxlen=0)
return next(counter)
在装有AMD Ryzen 7 5800H和16 GB RAM的Windows 11、Python 3.11机器上,我得到了以下输出:
10000000 loops, best of 5: 103 nsec per loop
10000000 loops, best of 5: 107 nsec per loop
10000000 loops, best of 5: 138 nsec per loop
10000000 loops, best of 5: 164 nsec per loop
10000000 loops, best of 5: 338 nsec per loop
10000000 loops, best of 5: 425 nsec per loop
这表明len(list(x))和len(tuple(x))是绑定的;后面跟着sum(map(lambda i: 1, x));然后紧靠sum(1 for _ in x);那么其他答案中提到的其他更复杂的方法和/或在基数中使用的方法至少要慢两倍。
不能(除非特定迭代器的类型实现了一些特定的方法,使之成为可能)。
通常,只能通过使用迭代器来计数迭代器项。最有效的方法之一:
import itertools
from collections import deque
def count_iter_items(iterable):
"""
Consume an iterable not reading it into memory; return the number of items.
"""
counter = itertools.count()
deque(itertools.izip(iterable, counter), maxlen=0) # (consume at C speed)
return next(counter)
(对于Python 3。X替换itertools。Izip with zip)。
这在理论上是不可能的:事实上,这就是“停止问题”。
证明
相反,假设可以使用函数len(g)来确定任何生成器g的长度(或无限长度)。
对于任何程序P,现在让我们将P转换为生成器g(P): 对于P中的每个返回点或出口点,产生一个值而不是返回它。
如果len(g(P)) ==无穷大,P不会停止。
这解决了暂停问题,这是不可能的,见维基百科。矛盾。
因此,如果不对泛型生成器进行迭代(==实际运行整个程序),就不可能对其元素进行计数。
更具体地说,考虑
def g():
while True:
yield "more?"
长度是无限的。这样的发生器有无穷多个。
关于你最初的问题,答案仍然是,在Python中通常没有办法知道迭代器的长度。
Given that you question is motivated by an application of the pysam library, I can give a more specific answer: I'm a contributer to PySAM and the definitive answer is that SAM/BAM files do not provide an exact count of aligned reads. Nor is this information easily available from a BAM index file. The best one can do is to estimate the approximate number of alignments by using the location of the file pointer after reading a number of alignments and extrapolating based on the total size of the file. This is enough to implement a progress bar, but not a method of counting alignments in constant time.
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